Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Chmp6P0C0A3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Chmp6P0C0A3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm5687-201ENSMUST00000118252 640 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm6447-201ENSMUST00000118905 835 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Chmp6P0C0A3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Chmp6P0C0A3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms