Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.31□□□□□ -0.44
ApoeP08226 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
ApoeP08226 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
ApoeP08226 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
ApoeP08226 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.3□□□□□ -0.44
ApoeP08226 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.3□□□□□ -0.44
ApoeP08226 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.3□□□□□ -0.44
ApoeP08226 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ApoeP08226 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.3□□□□□ -0.44
ApoeP08226 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.3□□□□□ -0.44
ApoeP08226 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
ApoeP08226 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
ApoeP08226 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ApoeP08226 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.29□□□□□ -0.44
ApoeP08226 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Gm12485-201ENSMUST00000119641 291 ntBASIC12.29□□□□□ -0.44
ApoeP08226 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.29□□□□□ -0.44
ApoeP08226 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.29□□□□□ -0.44
ApoeP08226 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
ApoeP08226 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ApoeP08226 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms