Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm12291-201ENSMUST00000121627 311 ntBASIC13.78□□□□□ -0.2
TnfP06804 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.78□□□□□ -0.2
TnfP06804 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TnfP06804 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC13.78□□□□□ -0.2
TnfP06804 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.78□□□□□ -0.2
TnfP06804 Gm2991-201ENSMUST00000173338 480 ntBASIC13.78□□□□□ -0.2
TnfP06804 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TnfP06804 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.78□□□□□ -0.2
TnfP06804 Cts7-204ENSMUST00000225321 1257 ntBASIC13.78□□□□□ -0.2
TnfP06804 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TnfP06804 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.78□□□□□ -0.2
TnfP06804 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TnfP06804 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.78□□□□□ -0.2
TnfP06804 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TnfP06804 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TnfP06804 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TnfP06804 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TnfP06804 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TnfP06804 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TnfP06804 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TnfP06804 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.77□□□□□ -0.21
TnfP06804 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.77□□□□□ -0.21
TnfP06804 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.77□□□□□ -0.21
TnfP06804 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
TnfP06804 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.77□□□□□ -0.21
TnfP06804 Gm38341-201ENSMUST00000195357 515 ntBASIC13.77□□□□□ -0.21
TnfP06804 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Gm43758-201ENSMUST00000199500 367 ntBASIC13.77□□□□□ -0.21
TnfP06804 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.77□□□□□ -0.21
TnfP06804 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.77□□□□□ -0.21
TnfP06804 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
TnfP06804 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TnfP06804 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TnfP06804 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.76□□□□□ -0.21
TnfP06804 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.76□□□□□ -0.21
TnfP06804 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TnfP06804 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Gm10434-201ENSMUST00000101158 471 ntBASIC13.76□□□□□ -0.21
TnfP06804 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Gm13350-201ENSMUST00000120519 479 ntBASIC13.76□□□□□ -0.21
TnfP06804 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.76□□□□□ -0.21
TnfP06804 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TnfP06804 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.76□□□□□ -0.21
TnfP06804 Gm6621-201ENSMUST00000193251 772 ntBASIC13.76□□□□□ -0.21
TnfP06804 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.76□□□□□ -0.21
TnfP06804 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.76□□□□□ -0.21
TnfP06804 Gm5904-201ENSMUST00000210286 865 ntBASIC13.76□□□□□ -0.21
TnfP06804 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC13.76□□□□□ -0.21
TnfP06804 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
TnfP06804 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
TnfP06804 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
TnfP06804 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
TnfP06804 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
TnfP06804 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms