Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
P06320 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC8.2□□□□□ -1.1
P06320 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC8.2□□□□□ -1.1
P06320 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC8.2□□□□□ -1.1
P06320 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC8.2□□□□□ -1.1
P06320 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC8.2□□□□□ -1.1
P06320 Gm11025-201ENSMUST00000140773 466 ntBASIC8.2□□□□□ -1.1
P06320 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC8.2□□□□□ -1.1
P06320 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC8.2□□□□□ -1.1
P06320 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC8.2□□□□□ -1.1
P06320 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC8.2□□□□□ -1.1
P06320 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC8.2□□□□□ -1.1
P06320 AC158538.1-201ENSMUST00000225870 294 ntBASIC8.2□□□□□ -1.1
P06320 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Gpr146-202ENSMUST00000053120 1040 ntBASIC8.2□□□□□ -1.1
P06320 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
P06320 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC8.2□□□□□ -1.1
P06320 Gm3695-201ENSMUST00000087222 1009 ntBASIC8.2□□□□□ -1.1
P06320 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Gm42863-201ENSMUST00000197875 2958 ntBASIC8.2□□□□□ -1.1
P06320 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC8.2□□□□□ -1.1
P06320 AC122840.1-201ENSMUST00000220915 3334 ntBASIC8.2□□□□□ -1.1
P06320 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
P06320 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
P06320 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
P06320 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC8.2□□□□□ -1.1
P06320 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
P06320 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
P06320 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.2□□□□□ -1.1
P06320 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
P06320 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 AC166574.4-201ENSMUST00000227165 1937 ntBASIC8.19□□□□□ -1.1
P06320 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
P06320 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC8.19□□□□□ -1.1
P06320 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
P06320 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
P06320 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC8.19□□□□□ -1.1
P06320 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC8.19□□□□□ -1.1
P06320 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC8.19□□□□□ -1.1
P06320 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC8.19□□□□□ -1.1
P06320 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC8.19□□□□□ -1.1
P06320 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC8.19□□□□□ -1.1
P06320 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
P06320 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC8.19□□□□□ -1.1
P06320 Gm44945-201ENSMUST00000206764 1187 ntBASIC8.19□□□□□ -1.1
P06320 Gm18057-201ENSMUST00000208220 503 ntBASIC8.19□□□□□ -1.1
P06320 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 AC132467.2-202ENSMUST00000227726 559 ntBASIC8.19□□□□□ -1.1
P06320 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
P06320 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms