Protein–RNA interactions for Protein: P03980

Ig heavy chain V region TEPC 1017, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P03980 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P03980 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.04□□□□□ -0.8
P03980 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.04□□□□□ -0.8
P03980 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
P03980 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
P03980 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC10.04□□□□□ -0.8
P03980 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
P03980 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC10.03□□□□□ -0.8
P03980 Gm44942-201ENSMUST00000096093 2072 ntBASIC10.03□□□□□ -0.8
P03980 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P03980 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
P03980 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.03□□□□□ -0.8
P03980 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.03□□□□□ -0.8
P03980 Gm11594-201ENSMUST00000122313 162 ntBASIC10.03□□□□□ -0.8
P03980 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
P03980 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC10.03□□□□□ -0.8
P03980 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
P03980 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC10.03□□□□□ -0.8
P03980 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Gm27397-201ENSMUST00000184997 107 ntBASIC10.03□□□□□ -0.8
P03980 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.03□□□□□ -0.8
P03980 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC10.03□□□□□ -0.8
P03980 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.03□□□□□ -0.8
P03980 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.03□□□□□ -0.8
P03980 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.03□□□□□ -0.8
P03980 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC10.03□□□□□ -0.8
P03980 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
P03980 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC10.03□□□□□ -0.8
P03980 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P03980 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P03980 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
P03980 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P03980 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
P03980 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.8
P03980 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.02□□□□□ -0.81
P03980 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.02□□□□□ -0.81
P03980 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.02□□□□□ -0.81
P03980 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC10.02□□□□□ -0.81
P03980 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.02□□□□□ -0.81
P03980 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC10.02□□□□□ -0.81
P03980 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
P03980 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC10.02□□□□□ -0.81
P03980 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
P03980 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms