Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Hoxa3P02831 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.92□□□□□ -0.66
Hoxa3P02831 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm22018-201ENSMUST00000104357 131 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm27572-201ENSMUST00000183702 255 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm44069-201ENSMUST00000204898 506 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm18054-201ENSMUST00000207539 555 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm2824-203ENSMUST00000226189 1228 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm10146-201ENSMUST00000072739 309 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Hoxa3P02831 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.91□□□□□ -0.66
Hoxa3P02831 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.91□□□□□ -0.66
Hoxa3P02831 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hoxa3P02831 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm43273-201ENSMUST00000199649 2594 ntBASIC10.9□□□□□ -0.66
Hoxa3P02831 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.9□□□□□ -0.66
Hoxa3P02831 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm44487-201ENSMUST00000205145 325 ntBASIC10.9□□□□□ -0.66
Hoxa3P02831 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.9□□□□□ -0.66
Hoxa3P02831 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hoxa3P02831 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Hoxa3P02831 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa3P02831 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa3P02831 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa3P02831 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa3P02831 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.9□□□□□ -0.67
Hoxa3P02831 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hoxa3P02831 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Hoxa3P02831 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.89□□□□□ -0.67
Hoxa3P02831 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hoxa3P02831 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa3P02831 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa3P02831 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxa3P02831 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms