Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC15.64■□□□□ 0.09
Col4a1P02463 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC15.64■□□□□ 0.09
Col4a1P02463 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Col4a1P02463 Gm42997-202ENSMUST00000200321 985 ntBASIC15.64■□□□□ 0.09
Col4a1P02463 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.64■□□□□ 0.09
Col4a1P02463 Gm43962-201ENSMUST00000203898 190 ntBASIC15.64■□□□□ 0.09
Col4a1P02463 Gm5051-201ENSMUST00000204085 485 ntBASIC15.64■□□□□ 0.09
Col4a1P02463 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.64■□□□□ 0.09
Col4a1P02463 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.64■□□□□ 0.09
Col4a1P02463 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.64■□□□□ 0.09
Col4a1P02463 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Col4a1P02463 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Col4a1P02463 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.63■□□□□ 0.09
Col4a1P02463 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm18730-201ENSMUST00000218038 343 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Col4a1P02463 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm24231-201ENSMUST00000104315 133 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a1P02463 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.63■□□□□ 0.09
Col4a1P02463 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC15.63■□□□□ 0.09
Col4a1P02463 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm7467-201ENSMUST00000185173 652 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Gm43378-201ENSMUST00000199336 582 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.63■□□□□ 0.09
Col4a1P02463 Spcs1-203ENSMUST00000226374 592 ntBASIC15.63■□□□□ 0.09
Col4a1P02463 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Col4a1P02463 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Col4a1P02463 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.62■□□□□ 0.09
Col4a1P02463 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Col4a1P02463 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.62■□□□□ 0.09
Col4a1P02463 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC15.62■□□□□ 0.09
Col4a1P02463 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.62■□□□□ 0.09
Col4a1P02463 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
Col4a1P02463 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Ntng1-201ENSMUST00000051253 327 ntBASIC15.62■□□□□ 0.09
Col4a1P02463 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Col4a1P02463 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.62■□□□□ 0.09
Col4a1P02463 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.62■□□□□ 0.09
Col4a1P02463 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Col4a1P02463 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms