Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
TcraP01849 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Mir698-201ENSMUST00000102164 109 ntBASIC9.48□□□□□ -0.89
TcraP01849 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC9.48□□□□□ -0.89
TcraP01849 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.48□□□□□ -0.89
TcraP01849 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC9.48□□□□□ -0.89
TcraP01849 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC9.48□□□□□ -0.89
TcraP01849 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
TcraP01849 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Gm6018-201ENSMUST00000216090 1306 ntBASIC9.48□□□□□ -0.89
TcraP01849 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
TcraP01849 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
TcraP01849 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm43273-201ENSMUST00000199649 2594 ntBASIC9.47□□□□□ -0.89
TcraP01849 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.47□□□□□ -0.89
TcraP01849 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm6222-201ENSMUST00000120787 396 ntBASIC9.47□□□□□ -0.89
TcraP01849 Gm9824-201ENSMUST00000178707 561 ntBASIC9.47□□□□□ -0.89
TcraP01849 Gm37714-201ENSMUST00000194742 342 ntBASIC9.47□□□□□ -0.89
TcraP01849 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.47□□□□□ -0.89
TcraP01849 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.47□□□□□ -0.89
TcraP01849 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Gm18049-201ENSMUST00000208909 581 ntBASIC9.47□□□□□ -0.89
TcraP01849 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.47□□□□□ -0.89
TcraP01849 AC132467.2-202ENSMUST00000227726 559 ntBASIC9.47□□□□□ -0.89
TcraP01849 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
TcraP01849 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
TcraP01849 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC9.47□□□□□ -0.89
TcraP01849 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC9.47□□□□□ -0.89
TcraP01849 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms