Protein–RNA interactions for Protein: O70480

Vamp4, Vesicle-associated membrane protein 4, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp4O70480 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Vamp4O70480 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.34■□□□□ 0.21
Vamp4O70480 Gm43133-201ENSMUST00000197472 463 ntBASIC16.34■□□□□ 0.21
Vamp4O70480 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Gm6992-201ENSMUST00000217973 1607 ntBASIC16.34■□□□□ 0.21
Vamp4O70480 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.34■□□□□ 0.21
Vamp4O70480 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vamp4O70480 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vamp4O70480 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vamp4O70480 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vamp4O70480 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vamp4O70480 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Vamp4O70480 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
Vamp4O70480 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.33■□□□□ 0.21
Vamp4O70480 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Vamp4O70480 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC16.33■□□□□ 0.2
Vamp4O70480 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC16.33■□□□□ 0.2
Vamp4O70480 Gm24548-201ENSMUST00000158650 108 ntBASIC16.33■□□□□ 0.2
Vamp4O70480 Gm27572-201ENSMUST00000183702 255 ntBASIC16.33■□□□□ 0.2
Vamp4O70480 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Vamp4O70480 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC16.33■□□□□ 0.2
Vamp4O70480 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 Gm9899-201ENSMUST00000065519 555 ntBASIC16.33■□□□□ 0.2
Vamp4O70480 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vamp4O70480 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vamp4O70480 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
Vamp4O70480 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Vamp4O70480 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.33■□□□□ 0.2
Vamp4O70480 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC16.32■□□□□ 0.2
Vamp4O70480 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 AC154747.3-201ENSMUST00000224471 3470 ntBASIC16.32■□□□□ 0.2
Vamp4O70480 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vamp4O70480 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vamp4O70480 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vamp4O70480 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC16.32■□□□□ 0.2
Vamp4O70480 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Vamp4O70480 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vamp4O70480 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC16.31■□□□□ 0.2
Vamp4O70480 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.31■□□□□ 0.2
Vamp4O70480 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Vamp4O70480 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.31■□□□□ 0.2
Vamp4O70480 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 AC093022.5-201ENSMUST00000226841 1079 ntBASIC16.31■□□□□ 0.2
Vamp4O70480 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Vamp4O70480 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.31■□□□□ 0.2
Vamp4O70480 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Vamp4O70480 AC241621.2-201ENSMUST00000223991 2151 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms