Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trdmt1O55055 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.27□□□□□ -0.12
Trdmt1O55055 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.27□□□□□ -0.12
Trdmt1O55055 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.27□□□□□ -0.12
Trdmt1O55055 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trdmt1O55055 Crry-ps-201ENSMUST00000079090 1309 ntBASIC14.27□□□□□ -0.12
Trdmt1O55055 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.27□□□□□ -0.13
Trdmt1O55055 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.27□□□□□ -0.13
Trdmt1O55055 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.27□□□□□ -0.13
Trdmt1O55055 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Trdmt1O55055 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trdmt1O55055 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm16296-201ENSMUST00000159905 325 ntBASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm8018-201ENSMUST00000173536 789 ntBASIC14.26□□□□□ -0.13
Trdmt1O55055 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Mir6927-201ENSMUST00000184494 71 ntBASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.26□□□□□ -0.13
Trdmt1O55055 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.26□□□□□ -0.13
Trdmt1O55055 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
Trdmt1O55055 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trdmt1O55055 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.25□□□□□ -0.13
Trdmt1O55055 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trdmt1O55055 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.25□□□□□ -0.13
Trdmt1O55055 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms