Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BckdkO55028 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
BckdkO55028 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
BckdkO55028 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
BckdkO55028 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.08□□□□□ -0.48
BckdkO55028 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.08□□□□□ -0.48
BckdkO55028 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.08□□□□□ -0.48
BckdkO55028 Gm6152-201ENSMUST00000151704 340 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC12.08□□□□□ -0.48
BckdkO55028 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
BckdkO55028 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.08□□□□□ -0.48
BckdkO55028 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
BckdkO55028 Gm10012-201ENSMUST00000078252 192 ntBASIC12.08□□□□□ -0.48
BckdkO55028 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
BckdkO55028 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
BckdkO55028 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Gm43630-201ENSMUST00000201550 776 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.07□□□□□ -0.48
BckdkO55028 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Itm2b-204ENSMUST00000228637 783 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
BckdkO55028 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.07□□□□□ -0.48
BckdkO55028 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
BckdkO55028 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.07□□□□□ -0.48
BckdkO55028 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.06□□□□□ -0.48
BckdkO55028 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BckdkO55028 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
BckdkO55028 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.06□□□□□ -0.48
BckdkO55028 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms