Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lsm2O35900 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Lsm2O35900 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Gm6447-201ENSMUST00000118905 835 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.56□□□□□ -0.56
Lsm2O35900 Gm27321-201ENSMUST00000185021 205 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.56□□□□□ -0.56
Lsm2O35900 AC159114.1-201ENSMUST00000220349 266 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lsm2O35900 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Lsm2O35900 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.56□□□□□ -0.56
Lsm2O35900 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Lsm2O35900 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Lsm2O35900 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.56□□□□□ -0.56
Lsm2O35900 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Lsm2O35900 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.55□□□□□ -0.56
Lsm2O35900 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm2O35900 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
Lsm2O35900 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.55□□□□□ -0.56
Lsm2O35900 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm2O35900 Cd63-ps-201ENSMUST00000145417 875 ntBASIC11.55□□□□□ -0.56
Lsm2O35900 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.55□□□□□ -0.56
Lsm2O35900 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm2O35900 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm2O35900 Gm27390-201ENSMUST00000184516 176 ntBASIC11.55□□□□□ -0.56
Lsm2O35900 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Lsm2O35900 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.55□□□□□ -0.56
Lsm2O35900 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Lsm2O35900 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Lsm2O35900 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Lsm2O35900 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.54□□□□□ -0.56
Lsm2O35900 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm2O35900 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm44831-201ENSMUST00000208469 2989 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Lsm2O35900 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms