Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Npc1O35604 Gm11637-201ENSMUST00000120601 592 ntBASIC12.71□□□□□ -0.37
Npc1O35604 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.71□□□□□ -0.37
Npc1O35604 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Npc1O35604 Gm26927-201ENSMUST00000182385 965 ntBASIC12.71□□□□□ -0.37
Npc1O35604 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.71□□□□□ -0.37
Npc1O35604 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.71□□□□□ -0.37
Npc1O35604 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Npc1O35604 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.71□□□□□ -0.38
Npc1O35604 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.71□□□□□ -0.38
Npc1O35604 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Npc1O35604 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Npc1O35604 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.71□□□□□ -0.38
Npc1O35604 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Npc1O35604 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Gm16177-201ENSMUST00000120728 718 ntBASIC12.7□□□□□ -0.38
Npc1O35604 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.7□□□□□ -0.38
Npc1O35604 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.7□□□□□ -0.38
Npc1O35604 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.7□□□□□ -0.38
Npc1O35604 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Npc1O35604 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Npc1O35604 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Npc1O35604 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Npc1O35604 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.69□□□□□ -0.38
Npc1O35604 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.69□□□□□ -0.38
Npc1O35604 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Npc1O35604 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Npc1O35604 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.69□□□□□ -0.38
Npc1O35604 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
Npc1O35604 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Npc1O35604 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.69□□□□□ -0.38
Npc1O35604 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Npc1O35604 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms