Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ptch2O35595 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Ptch2O35595 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Ptch2O35595 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ptch2O35595 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ptch2O35595 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ptch2O35595 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Snord83b-201ENSMUST00000104546 94 ntBASIC13.33□□□□□ -0.28
Ptch2O35595 Mir877-201ENSMUST00000104738 85 ntBASIC13.33□□□□□ -0.28
Ptch2O35595 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Ptch2O35595 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.33□□□□□ -0.28
Ptch2O35595 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Ptch2O35595 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ptch2O35595 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Ptch2O35595 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.33□□□□□ -0.28
Ptch2O35595 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ptch2O35595 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ptch2O35595 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.32□□□□□ -0.28
Ptch2O35595 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ptch2O35595 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ptch2O35595 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ptch2O35595 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ptch2O35595 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.32□□□□□ -0.28
Ptch2O35595 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Gm6082-201ENSMUST00000215204 454 ntBASIC13.32□□□□□ -0.28
Ptch2O35595 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ptch2O35595 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.31□□□□□ -0.28
Ptch2O35595 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.31□□□□□ -0.28
Ptch2O35595 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.31□□□□□ -0.28
Ptch2O35595 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.31□□□□□ -0.28
Ptch2O35595 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.31□□□□□ -0.28
Ptch2O35595 Morn2-202ENSMUST00000227729 656 ntBASIC13.31□□□□□ -0.28
Ptch2O35595 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ptch2O35595 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ptch2O35595 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ptch2O35595 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ptch2O35595 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.3□□□□□ -0.28
Ptch2O35595 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ptch2O35595 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms