Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Gm17150-201ENSMUST00000165577 381 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Mir6392-201ENSMUST00000184924 108 ntBASIC12.12□□□□□ -0.47
Hps1O08983 AY702102-202ENSMUST00000194651 1173 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Gm43703-201ENSMUST00000200523 763 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Gm16476-201ENSMUST00000221544 139 ntBASIC12.12□□□□□ -0.47
Hps1O08983 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Dupd1-202ENSMUST00000224735 548 ntBASIC12.12□□□□□ -0.47
Hps1O08983 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hps1O08983 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hps1O08983 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Hps1O08983 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hps1O08983 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hps1O08983 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hps1O08983 Mir6420-201ENSMUST00000185032 102 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Gm45841-201ENSMUST00000207700 164 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Gm9229-201ENSMUST00000222777 126 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Gm9797-201ENSMUST00000052902 613 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hps1O08983 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.11□□□□□ -0.47
Hps1O08983 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Hps1O08983 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hps1O08983 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hps1O08983 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.1□□□□□ -0.47
Hps1O08983 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hps1O08983 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hps1O08983 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms