Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.38□□□□□ -0.27
Trove2O08848 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.38□□□□□ -0.27
Trove2O08848 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.38□□□□□ -0.27
Trove2O08848 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trove2O08848 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trove2O08848 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trove2O08848 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trove2O08848 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Gm4875-201ENSMUST00000118257 786 ntBASIC13.37□□□□□ -0.27
Trove2O08848 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.37□□□□□ -0.27
Trove2O08848 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.37□□□□□ -0.27
Trove2O08848 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.37□□□□□ -0.27
Trove2O08848 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.37□□□□□ -0.27
Trove2O08848 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.37□□□□□ -0.27
Trove2O08848 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.37□□□□□ -0.27
Trove2O08848 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trove2O08848 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trove2O08848 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trove2O08848 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trove2O08848 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trove2O08848 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.36□□□□□ -0.27
Trove2O08848 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.36□□□□□ -0.27
Trove2O08848 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trove2O08848 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.36□□□□□ -0.27
Trove2O08848 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trove2O08848 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trove2O08848 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trove2O08848 Map1b-203ENSMUST00000223725 2669 ntBASIC13.36□□□□□ -0.27
Trove2O08848 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trove2O08848 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms