Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
AlyrefO08583 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
AlyrefO08583 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.21□□□□□ -0.29
AlyrefO08583 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.21□□□□□ -0.29
AlyrefO08583 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.21□□□□□ -0.29
AlyrefO08583 Gm15432-201ENSMUST00000121106 195 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
AlyrefO08583 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
AlyrefO08583 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 Gm44405-201ENSMUST00000198952 126 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.21□□□□□ -0.29
AlyrefO08583 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Gm8325-201ENSMUST00000099086 453 ntBASIC13.21□□□□□ -0.29
AlyrefO08583 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
AlyrefO08583 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.21□□□□□ -0.3
AlyrefO08583 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
AlyrefO08583 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AlyrefO08583 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AlyrefO08583 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
AlyrefO08583 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
AlyrefO08583 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
AlyrefO08583 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
AlyrefO08583 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
AlyrefO08583 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm24548-201ENSMUST00000158650 108 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm27046-201ENSMUST00000182160 463 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC13.2□□□□□ -0.3
AlyrefO08583 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm9555-201ENSMUST00000200908 583 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.2□□□□□ -0.3
AlyrefO08583 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
AlyrefO08583 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.2□□□□□ -0.3
AlyrefO08583 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
AlyrefO08583 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
AlyrefO08583 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
AlyrefO08583 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms