Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Shisa8J3QNX5 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm27618-201ENSMUST00000183671 60 ntBASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm27772-201ENSMUST00000184900 187 ntBASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm7390-201ENSMUST00000212452 1216 ntBASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm17795-201ENSMUST00000214505 757 ntBASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Shisa8J3QNX5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm25144-201ENSMUST00000179561 110 ntBASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm25352-201ENSMUST00000179815 110 ntBASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm6888-201ENSMUST00000221983 706 ntBASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Chchd1-203ENSMUST00000224633 557 ntBASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Shisa8J3QNX5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shisa8J3QNX5 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms