Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ccdc180J3QNE4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12616-201ENSMUST00000118594 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm13408-201ENSMUST00000119822 798 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm13935-201ENSMUST00000121859 798 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12624-201ENSMUST00000177615 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12621-201ENSMUST00000177760 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12615-201ENSMUST00000177970 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12622-201ENSMUST00000177975 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12627-201ENSMUST00000178412 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12625-201ENSMUST00000179122 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12614-201ENSMUST00000179586 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm12613-201ENSMUST00000180323 382 ntBASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Ccdc180J3QNE4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 AY036118-201ENSMUST00000200021 923 ntBASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ccdc180J3QNE4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Gm44551-201ENSMUST00000208804 171 ntBASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Olfr1347-205ENSMUST00000220413 964 ntBASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Spcs1-203ENSMUST00000226374 592 ntBASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Gm44126-201ENSMUST00000204831 514 ntBASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ccdc180J3QNE4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Gm19353-201ENSMUST00000184561 445 ntBASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Aprt-ps-201ENSMUST00000212311 505 ntBASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Gm10076-201ENSMUST00000073238 384 ntBASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ccdc180J3QNE4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms