Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm10434-201ENSMUST00000101158 471 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm8805-201ENSMUST00000117848 313 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm14277-201ENSMUST00000121195 360 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Gm34767-201ENSMUST00000191813 1062 ntBASIC16.51■□□□□ 0.23
ScaperF8VQ70 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ScaperF8VQ70 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Gm7857-201ENSMUST00000117957 358 ntBASIC16.5■□□□□ 0.23
ScaperF8VQ70 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Gm18615-201ENSMUST00000222919 1031 ntBASIC16.5■□□□□ 0.23
ScaperF8VQ70 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ScaperF8VQ70 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
ScaperF8VQ70 AC238940.1-201ENSMUST00000225106 1858 ntBASIC16.5■□□□□ 0.23
ScaperF8VQ70 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC16.49■□□□□ 0.23
ScaperF8VQ70 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Gm4768-201ENSMUST00000206199 686 ntBASIC16.49■□□□□ 0.23
ScaperF8VQ70 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ScaperF8VQ70 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms