Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm11509-201ENSMUST00000117358 325 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm22144-201ENSMUST00000157402 102 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm23771-201ENSMUST00000178702 110 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Mir6923-201ENSMUST00000184592 72 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Gm11470-201ENSMUST00000118868 1475 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Sorbs3-204ENSMUST00000227929 2460 ntBASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Zc3h13E9Q784 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm28719-201ENSMUST00000187779 1757 ntBASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm23596-201ENSMUST00000104304 132 ntBASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm6397-201ENSMUST00000161973 1069 ntBASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Gm7551-201ENSMUST00000089593 1074 ntBASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Zc3h13E9Q784 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Gm12948-201ENSMUST00000119406 682 ntBASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Mt1-202ENSMUST00000211807 1085 ntBASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Zc3h13E9Q784 Gm43858-201ENSMUST00000199418 1778 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Gm24231-201ENSMUST00000104315 133 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Gm15595-201ENSMUST00000120840 961 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Gm5733-201ENSMUST00000190232 939 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 AC171277.1-201ENSMUST00000216902 1441 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Retreg1-206ENSMUST00000228306 1430 ntBASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Zc3h13E9Q784 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms