Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.82□□□□□ -0.36
Srp54bE9PXC0 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm12502-201ENSMUST00000120197 444 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm4857-201ENSMUST00000192718 785 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm32025-201ENSMUST00000217960 307 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Srp54bE9PXC0 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm10434-201ENSMUST00000101158 471 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm24255-201ENSMUST00000104481 128 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Mir874-201ENSMUST00000104769 76 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm14381-201ENSMUST00000122105 414 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm26083-201ENSMUST00000157904 193 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Mir7221-201ENSMUST00000184009 72 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Gm27320-201ENSMUST00000184892 109 ntBASIC12.8□□□□□ -0.36
Srp54bE9PXC0 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms