Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Clca3bE9PUL3 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Gm11793-201ENSMUST00000120433 981 ntBASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.97□□□□□ -0.17
Clca3bE9PUL3 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Mir339-201ENSMUST00000083659 96 ntBASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC13.97□□□□□ -0.17
Clca3bE9PUL3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm45930-201ENSMUST00000221330 292 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Gm7399-201ENSMUST00000032395 858 ntBASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Clca3bE9PUL3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.96□□□□□ -0.18
Clca3bE9PUL3 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Gm13813-201ENSMUST00000120998 787 ntBASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.95□□□□□ -0.18
Clca3bE9PUL3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms