Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Mir1982-201ENSMUST00000157368 74 ntBASIC12.67□□□□□ -0.38
Clip3B9EHT4 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.67□□□□□ -0.38
Clip3B9EHT4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm18473-201ENSMUST00000220543 868 ntBASIC12.67□□□□□ -0.38
Clip3B9EHT4 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.67□□□□□ -0.38
Clip3B9EHT4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clip3B9EHT4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.66□□□□□ -0.38
Clip3B9EHT4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm7561-201ENSMUST00000211203 886 ntBASIC12.66□□□□□ -0.38
Clip3B9EHT4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clip3B9EHT4 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clip3B9EHT4 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms