Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm12403-201ENSMUST00000121384 959 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Usf3B2RUQ2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm29127-201ENSMUST00000188304 517 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm42627-201ENSMUST00000197347 224 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Gm5989-201ENSMUST00000096092 2077 ntBASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.87□□□□□ -0.67
Usf3B2RUQ2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm8213-201ENSMUST00000118191 441 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm22902-201ENSMUST00000158488 302 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm37259-201ENSMUST00000193903 849 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm18041-201ENSMUST00000218210 618 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm5161-201ENSMUST00000075243 853 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Snora73a-201ENSMUST00000082453 205 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.86□□□□□ -0.67
Usf3B2RUQ2 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usf3B2RUQ2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms