Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm8451-201ENSMUST00000170338 447 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm27675-201ENSMUST00000184527 94 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Chd6A3KFM7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm7536-201ENSMUST00000077389 444 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Gm5453-201ENSMUST00000080866 447 ntBASIC10.42□□□□□ -0.74
Chd6A3KFM7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Chd6A3KFM7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm11578-201ENSMUST00000118530 459 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm14724-201ENSMUST00000118400 537 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm7719-201ENSMUST00000182374 975 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Gm43777-201ENSMUST00000197269 376 ntTSL 3 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.41□□□□□ -0.74
Chd6A3KFM7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Chd6A3KFM7 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Gm43997-201ENSMUST00000203986 1005 ntBASIC10.4□□□□□ -0.74
Chd6A3KFM7 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 AC131690.1-201ENSMUST00000218406 374 ntBASIC10.4□□□□□ -0.74
Chd6A3KFM7 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC10.4□□□□□ -0.74
Chd6A3KFM7 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Chd6A3KFM7 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms