Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac6Q9Z2V5 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.22■□□□□ 0.19
Hdac6Q9Z2V5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac6Q9Z2V5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hdac6Q9Z2V5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.22■□□□□ 0.19
Hdac6Q9Z2V5 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm12266-201ENSMUST00000120311 962 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm17812-201ENSMUST00000204935 318 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 AC165260.3-202ENSMUST00000224550 1031 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hdac6Q9Z2V5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hdac6Q9Z2V5 Gm9025-201ENSMUST00000122415 1575 ntBASIC16.21■□□□□ 0.18
Hdac6Q9Z2V5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC16.21■□□□□ 0.18
Hdac6Q9Z2V5 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Mir7032-201ENSMUST00000185154 79 ntBASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Gm28882-201ENSMUST00000185504 314 ntBASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Hdac6Q9Z2V5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12616-201ENSMUST00000118594 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm23699-201ENSMUST00000158835 135 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12624-201ENSMUST00000177615 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12621-201ENSMUST00000177760 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12615-201ENSMUST00000177970 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12622-201ENSMUST00000177975 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12627-201ENSMUST00000178412 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12625-201ENSMUST00000179122 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12614-201ENSMUST00000179586 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm12613-201ENSMUST00000180323 382 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 AU022133-201ENSMUST00000200601 873 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm10109-202ENSMUST00000206890 1211 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm39404-201ENSMUST00000216350 313 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm18730-201ENSMUST00000218038 343 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Gm9826-201ENSMUST00000029124 1299 ntBASIC16.19■□□□□ 0.18
Hdac6Q9Z2V5 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 147.3 ms