Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm17330-201ENSMUST00000221047 165 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Crlf3Q9Z2L7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm27772-201ENSMUST00000184900 187 ntBASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.16□□□□□ -0.3
Crlf3Q9Z2L7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Crlf3Q9Z2L7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms