Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cldn9Q9Z0S7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cldn9Q9Z0S7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Gm38671-201ENSMUST00000200573 130 ntBASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cldn9Q9Z0S7 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm14928-201ENSMUST00000120198 477 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm23984-201ENSMUST00000157139 203 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm6180-201ENSMUST00000065243 498 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.51□□□□□ -0.41
Cldn9Q9Z0S7 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.5□□□□□ -0.41
Cldn9Q9Z0S7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms