Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm13350-201ENSMUST00000120519 479 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm2991-201ENSMUST00000173338 480 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Smarcb1Q9Z0H3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm6621-201ENSMUST00000193251 772 ntBASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Smarcb1Q9Z0H3 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Smarcb1Q9Z0H3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms