Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.58□□□□□ -0.08
AmfrQ9R049 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.58□□□□□ -0.08
AmfrQ9R049 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
AmfrQ9R049 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.58□□□□□ -0.08
AmfrQ9R049 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 AC151895.1-201ENSMUST00000219025 1742 ntBASIC14.58□□□□□ -0.08
AmfrQ9R049 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.08
AmfrQ9R049 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm44851-201ENSMUST00000205735 2309 ntBASIC14.57□□□□□ -0.08
AmfrQ9R049 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
AmfrQ9R049 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.57□□□□□ -0.08
AmfrQ9R049 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.57□□□□□ -0.08
AmfrQ9R049 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Gm8652-201ENSMUST00000181363 964 ntBASIC14.56□□□□□ -0.08
AmfrQ9R049 Gm7561-201ENSMUST00000211203 886 ntBASIC14.56□□□□□ -0.08
AmfrQ9R049 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
AmfrQ9R049 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.56□□□□□ -0.08
AmfrQ9R049 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
AmfrQ9R049 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.55□□□□□ -0.08
AmfrQ9R049 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AmfrQ9R049 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
AmfrQ9R049 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AmfrQ9R049 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
AmfrQ9R049 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
AmfrQ9R049 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AmfrQ9R049 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
AmfrQ9R049 Gm13829-201ENSMUST00000119600 138 ntBASIC14.55□□□□□ -0.08
AmfrQ9R049 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.55□□□□□ -0.08
AmfrQ9R049 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
AmfrQ9R049 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms