Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Mir339-201ENSMUST00000083659 96 ntBASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Upk3aQ9JKX8 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm11425-201ENSMUST00000119608 498 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm8099-201ENSMUST00000200510 742 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm9396-201ENSMUST00000076703 567 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Upk3aQ9JKX8 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Gm14921-201ENSMUST00000118643 908 ntBASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Mir1982-201ENSMUST00000157368 74 ntBASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upk3aQ9JKX8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upk3aQ9JKX8 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms