Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Hmgn3Q9DCB1 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm4995-201ENSMUST00000117247 432 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm21470-201ENSMUST00000187680 696 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm19184-201ENSMUST00000196798 928 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Hmgn3Q9DCB1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Hmgn3Q9DCB1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Gm33320-201ENSMUST00000192232 530 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Hmgn3Q9DCB1 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms