Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Gm27572-201ENSMUST00000183702 255 ntBASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Cdc40Q9DC48 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm11803-201ENSMUST00000119966 444 ntBASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm10478-201ENSMUST00000084451 396 ntBASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Cdc40Q9DC48 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm13392-201ENSMUST00000117708 150 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm8810-201ENSMUST00000172895 754 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm24196-201ENSMUST00000179161 110 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm29127-201ENSMUST00000188304 517 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm43818-201ENSMUST00000200605 466 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Itm2b-204ENSMUST00000228637 783 ntBASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdc40Q9DC48 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms