Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Mir3113-201ENSMUST00000175478 76 ntBASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Gm44124-201ENSMUST00000204159 472 ntBASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hmg20aQ9DC33 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm17271-201ENSMUST00000165535 355 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 AC166341.4-201ENSMUST00000220625 123 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Bloc1s5-203ENSMUST00000224902 612 ntBASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.86□□□□□ -0.51
Hmg20aQ9DC33 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hmg20aQ9DC33 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms