Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.1■□□□□ 0.33
U2af1Q9D883 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
U2af1Q9D883 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
U2af1Q9D883 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Gm22121-201ENSMUST00000175148 54 ntBASIC17.1■□□□□ 0.33
U2af1Q9D883 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.1■□□□□ 0.33
U2af1Q9D883 Gm44974-201ENSMUST00000206387 1279 ntBASIC17.1■□□□□ 0.33
U2af1Q9D883 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC17.1■□□□□ 0.33
U2af1Q9D883 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 AC140406.1-201ENSMUST00000226481 465 ntBASIC17.1■□□□□ 0.33
U2af1Q9D883 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
U2af1Q9D883 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
U2af1Q9D883 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
U2af1Q9D883 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
U2af1Q9D883 AC137842.1-201ENSMUST00000227896 2064 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm37691-201ENSMUST00000192147 2573 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm16379-201ENSMUST00000161469 348 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm5850-201ENSMUST00000192923 1206 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Gm8762-201ENSMUST00000193486 339 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.09■□□□□ 0.33
U2af1Q9D883 AC133598.1-201ENSMUST00000224327 660 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 AC153366.2-201ENSMUST00000219461 1984 ntBASIC17.09■□□□□ 0.33
U2af1Q9D883 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
U2af1Q9D883 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC17.09■□□□□ 0.33
U2af1Q9D883 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.08■□□□□ 0.33
U2af1Q9D883 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 CT030684.3-201ENSMUST00000227308 2445 ntBASIC17.08■□□□□ 0.33
U2af1Q9D883 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
U2af1Q9D883 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
U2af1Q9D883 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
U2af1Q9D883 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms