Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Chmp4cQ9D7F7 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Auts2-212ENSMUST00000178555 309 ntBASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Chmp4cQ9D7F7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm12341-201ENSMUST00000119724 503 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp4cQ9D7F7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm43321-201ENSMUST00000198897 2409 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm6447-201ENSMUST00000118905 835 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm5354-201ENSMUST00000182417 973 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm10576-201ENSMUST00000191927 825 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Gm26315-201ENSMUST00000083890 321 ntBASIC15.55■□□□□ 0.08
Chmp4cQ9D7F7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms