Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Cog3-203ENSMUST00000227473 4197 ntBASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3a3Q9D554 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3a3Q9D554 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm18057-201ENSMUST00000208220 503 ntBASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Sf3a3Q9D554 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms