Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Gm3404Q9D506 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Gm3404Q9D506 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.83□□□□□ -0.19
Gm3404Q9D506 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.83□□□□□ -0.2
Gm3404Q9D506 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm13829-201ENSMUST00000119600 138 ntBASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm27331-201ENSMUST00000183705 60 ntBASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.83□□□□□ -0.2
Gm3404Q9D506 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.83□□□□□ -0.2
Gm3404Q9D506 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Gm3404Q9D506 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.82□□□□□ -0.2
Gm3404Q9D506 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Gm38049-201ENSMUST00000195698 1372 ntBASIC13.82□□□□□ -0.2
Gm3404Q9D506 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Gm3404Q9D506 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.81□□□□□ -0.2
Gm3404Q9D506 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Gm3404Q9D506 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms