Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trim13Q9CYB0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Mir449b-201ENSMUST00000104833 80 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm15240-201ENSMUST00000118156 720 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trim13Q9CYB0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trim13Q9CYB0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trim13Q9CYB0 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms