Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nip7Q9CXK8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nip7Q9CXK8 AC167013.2-201ENSMUST00000228520 2684 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Gm5846-201ENSMUST00000193146 1414 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Gm12291-201ENSMUST00000121627 311 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Gm22902-201ENSMUST00000158488 302 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Mir6927-201ENSMUST00000184494 71 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nip7Q9CXK8 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm13736-201ENSMUST00000119272 253 ntBASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nip7Q9CXK8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm5989-201ENSMUST00000096092 2077 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Mir874-201ENSMUST00000104769 76 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm6652-201ENSMUST00000186414 1070 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm37201-201ENSMUST00000191845 523 ntBASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nip7Q9CXK8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms