Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retreg3Q9CQV4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm18630-201ENSMUST00000222109 1397 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm6461-201ENSMUST00000120015 633 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm18717-201ENSMUST00000192744 1241 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm37845-201ENSMUST00000194977 355 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gm5178-201ENSMUST00000219380 898 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retreg3Q9CQV4 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Retreg3Q9CQV4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retreg3Q9CQV4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm14350-201ENSMUST00000116642 640 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm12656-201ENSMUST00000118149 577 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm44038-201ENSMUST00000203952 889 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm8598-201ENSMUST00000221184 836 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Itm2b-204ENSMUST00000228637 783 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retreg3Q9CQV4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retreg3Q9CQV4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms