Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trim33Q99PP7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.97□□□□□ -0.33
Trim33Q99PP7 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gm6152-201ENSMUST00000151704 340 ntBASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gm9002-201ENSMUST00000178437 499 ntBASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.97□□□□□ -0.33
Trim33Q99PP7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Pck2-205ENSMUST00000226352 2784 ntBASIC12.97□□□□□ -0.33
Trim33Q99PP7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim33Q99PP7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.96□□□□□ -0.33
Trim33Q99PP7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim33Q99PP7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim33Q99PP7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim33Q99PP7 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim33Q99PP7 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.95□□□□□ -0.34
Trim33Q99PP7 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim33Q99PP7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms