Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 AL645783.1-201ENSMUST00000221416 1832 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Mir706-201ENSMUST00000102262 84 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm13689-201ENSMUST00000119360 685 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm12485-201ENSMUST00000119641 291 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm29741-201ENSMUST00000192667 421 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm25131-201ENSMUST00000082653 151 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.06■□□□□ 0.32
Rtn4Q99P72 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtn4Q99P72 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm14730-201ENSMUST00000122378 1045 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 4930471M09Rik-201ENSMUST00000181849 1112 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm7498-201ENSMUST00000203282 1084 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 AC159196.2-201ENSMUST00000224082 1622 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm37057-201ENSMUST00000192624 1916 ntBASIC17.05■□□□□ 0.32
Rtn4Q99P72 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtn4Q99P72 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.04■□□□□ 0.32
Rtn4Q99P72 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Gm8775-201ENSMUST00000170943 1327 ntBASIC17.04■□□□□ 0.32
Rtn4Q99P72 Gm28359-201ENSMUST00000187470 1322 ntBASIC17.04■□□□□ 0.32
Rtn4Q99P72 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtn4Q99P72 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms