Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nkd1Q99MH6 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.28□□□□□ -0.44
Nkd1Q99MH6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gm42550-201ENSMUST00000201553 960 ntBASIC12.28□□□□□ -0.44
Nkd1Q99MH6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.28□□□□□ -0.44
Nkd1Q99MH6 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.28□□□□□ -0.44
Nkd1Q99MH6 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Nkd1Q99MH6 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Nkd1Q99MH6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nkd1Q99MH6 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms