Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm44100-201ENSMUST00000204329 436 ntBASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nkx6-1Q99MA9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12616-201ENSMUST00000118594 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm14109-201ENSMUST00000118814 309 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12624-201ENSMUST00000177615 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm25700-201ENSMUST00000177693 110 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12621-201ENSMUST00000177760 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12615-201ENSMUST00000177970 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12622-201ENSMUST00000177975 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12627-201ENSMUST00000178412 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12625-201ENSMUST00000179122 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12614-201ENSMUST00000179586 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm12613-201ENSMUST00000180323 382 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Nkx6-1Q99MA9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm3096-201ENSMUST00000185770 364 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm3508-201ENSMUST00000186012 792 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm45118-201ENSMUST00000208928 825 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Nkx6-1Q99MA9 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Nkx6-1Q99MA9 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms