Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm5867-201ENSMUST00000063197 592 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap3Q99LM2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm13689-201ENSMUST00000119360 685 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap3Q99LM2 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap3Q99LM2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms