Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Cstf3Q99LI7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gm37917-201ENSMUST00000194711 392 ntBASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Cstf3Q99LI7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Mir6977-201ENSMUST00000184960 64 ntBASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Gm18624-201ENSMUST00000220966 658 ntBASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Cstf3Q99LI7 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gm7488-201ENSMUST00000117148 684 ntBASIC12.59□□□□□ -0.39
Cstf3Q99LI7 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gm27437-201ENSMUST00000183429 107 ntBASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.59□□□□□ -0.39
Cstf3Q99LI7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Cstf3Q99LI7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms