Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Gm5035-201ENSMUST00000215581 927 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb6Q91XZ4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Gm11637-201ENSMUST00000120601 592 ntBASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb6Q91XZ4 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Gm13813-201ENSMUST00000120998 787 ntBASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb6Q91XZ4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms