Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm37917-201ENSMUST00000194711 392 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm7653-201ENSMUST00000214567 508 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm15823-201ENSMUST00000064305 670 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga11Q91XY8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Gm12490-201ENSMUST00000120255 560 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Gm18018-201ENSMUST00000198273 408 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Gm6745-201ENSMUST00000199216 526 ntBASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga11Q91XY8 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga11Q91XY8 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms